The detailed information of tRNA gene sequence


Sequence ID>WENV180087050
Genome IDMPME02045065
Search identical group
Phylum/Class[MPME] marine metagenome; 150 m water sample filtered on 30 um supor filter
Species
Start position on genome 1619
End posion on genome 1545
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tagagaggcc
tRNA gene sequence 
GTACAGGTGCCGGAGTGGTCTAACGGGGTGGTTTGCAAAACCATTGTTCGTGGGTTCGAA
TCCCACCCTGTACTCat
Downstream region at tRNA end position 
ggggctgtag
Secondary structure (Cloverleaf model)
>WENV180087050	Cys	GCA
                   c      TCat ggggctgtag
                     G - C
                     T - A
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      C T A        G     TGTTC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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