The detailed information of tRNA gene sequence


Sequence ID>WENV180087172
Genome IDMPME02061052
Search identical group
Phylum/Class[MPME] marine metagenome; 150 m water sample filtered on 30 um supor filter
Species
Start position on genome 161
End posion on genome 71
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtcttattta
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCGCTCCCCTGCTAAGGGAGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaggcttatt
Secondary structure (Cloverleaf model)
>WENV180087172	Ser	GCT
                   a      GCCA gaggcttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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