The detailed information of tRNA gene sequence


Sequence ID>WENV180087225
Genome IDMPME02067265
Search identical group
Phylum/Class[MPME] marine metagenome; 150 m water sample filtered on 30 um supor filter
Species
Start position on genome 4322
End posion on genome 4413
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaacattt
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGTGAGTAATCGGGGATAACC
TGGTTCGAGAGTTCGAATCTCTCCCTCTCCGCac
Downstream region at tRNA end position 
tttaatagac
Secondary structure (Cloverleaf model)
>WENV180087225	Ser	GCT
                   t      GCac tttaatagac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G A G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAATCGGGGATAACCTGGTTC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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