The detailed information of tRNA gene sequence


Sequence ID>WENV180087377
Genome IDMPME02083330
Search identical group
Phylum/Class[MPME] marine metagenome; 150 m water sample filtered on 30 um supor filter
Species
Start position on genome 182
End posion on genome 92
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaataaaacc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCATGATTGGAATTCATGTATACGGTAACCCCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atttctacaa
Secondary structure (Cloverleaf model)
>WENV180087377	Ser	GGA
                   c      GCCA atttctacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGTAACCCCGTATC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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