The detailed information of tRNA gene sequence


Sequence ID>WENV180087406
Genome IDMPME02086075
Search identical group
Phylum/Class[MPME] marine metagenome; 150 m water sample filtered on 30 um supor filter
Species
Start position on genome 6192
End posion on genome 6094
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
catcgagatt
tRNA gene sequence 
GGAAGCGTTCCCAAGGCTGGTGCCTGGCTCGGACTTCAAATCCGATGGGGGGCGCGGCGA
CGCGTCCCCGGCGGGTTCGATTCCCGTCCGCTTCCGCCA
Downstream region at tRNA end position 
ccgatccgaa
Secondary structure (Cloverleaf model)
>WENV180087406	SeC	TCA
                   t      GCCA ccgatccgaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    T     T G C C C     A
      C G G        C      + | | | |     G
    T       A A C C       G C G G G     C
    G         | | |                 T T
    G       C T G G
      T G C        C     TGGGGGGCGCGGCGACGCGTCCCCG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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