The detailed information of tRNA gene sequence


Sequence ID>WENV180087531
Genome IDMPME02097973
Search identical group
Phylum/Class[MPME] marine metagenome; 150 m water sample filtered on 30 um supor filter
Species
Start position on genome 4137
End posion on genome 4049
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaacagataa
tRNA gene sequence 
GCATCTATGGCCGAGGGGTCGAAGGCAGTGGACTCATAATCCTCTTTCCTATATTAAGGA
CATCGCTGGTTCAAATCCAGCTAGATGCAgtt
Downstream region at tRNA end position 
aatcttcgtg
Secondary structure (Cloverleaf model)
>WENV180087531	Met	CAT
                   a      Agtt aatcttcgtg
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T - A
                     A - T          T A
                    T     C G A C C     A
      G G A        G      | | | | |     A
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     TTTCCTATATTAAGGACATC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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