The detailed information of tRNA gene sequence


Sequence ID>WENV180087623
Genome IDMPME02109928
Search identical group
Phylum/Class[MPME] marine metagenome; 150 m water sample filtered on 30 um supor filter
Species
Start position on genome 707
End posion on genome 608
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aacaaagcgt
tRNA gene sequence 
GGAAGTGCTTGCACACCTGGTGGTGGCCTCGGTCTTCAAAACCGTCGGATCGTACGTTAA
CCGTGTGATCGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ttttttcttg
Secondary structure (Cloverleaf model)
>WENV180087623	SeC	TCA
                   t      GCCA ttttttcttg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    T     T A C C C     A
      C C A        T      + | | | |     G
    T       C A C G       G T G G G     C
    G           | |                 T T
    G       T G G C
      T G G        C     CGGATCGTACGTTAACCGTGTGATCG
                    T   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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