The detailed information of tRNA gene sequence


Sequence ID>WENV180087845
Genome IDMPMF02000389
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1806
End posion on genome 1730
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaccattgt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGAG
CCCCGTCACTCCCGCCA
Downstream region at tRNA end position 
ccgttgacta
Secondary structure (Cloverleaf model)
>WENV180087845	Asp	GTC
                   t      GCCA ccgttgacta
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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