The detailed information of tRNA gene sequence


Sequence ID>WENV180087861
Genome IDMPMF02001119
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 475
End posion on genome 550
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cccttcctgc
tRNA gene sequence 
AGGGGTGTAGCTCATCTGGTAGAGCATCGGTCTCCAAAACCGAGGGCCACGGGTTCGAAT
CCTGTCACCCCTGCCA
Downstream region at tRNA end position 
tttccttttc
Secondary structure (Cloverleaf model)
>WENV180087861	Trp	CCA
                   c      GCCA tttccttttc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C T A        A      | | + | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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