The detailed information of tRNA gene sequence


Sequence ID>WENV180087871
Genome IDMPMF02001601
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 572
End posion on genome 487
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atcaattttT
tRNA gene sequence 
GCAGAGGTCGCCTAGCCTGGTAGGGCGCGGGCCTTGAGAGCCTGTGTTCGTAAGAACGCG
GGGGTTCAAATCCCTCTCTCTGCGTta
Downstream region at tRNA end position 
ttttttgcta
Secondary structure (Cloverleaf model)
>WENV180087871	Ser	TGA
                   T      GTta ttttttgcta
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGTAAGAACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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