The detailed information of tRNA gene sequence


Sequence ID>WENV180087886
Genome IDMPMF02002139
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 139332
End posion on genome 139258
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcggggacac
tRNA gene sequence 
AGGGCAGTGGCTCAAATGGCTAGAGCACCGGTCTCCAAAACCGGCGGTTGAGGGTTCGAG
TCCCTCCTGCCCTGCaa
Downstream region at tRNA end position 
ggccagtcgg
Secondary structure (Cloverleaf model)
>WENV180087886	Trp	CCA
                   c      GCaa ggccagtcgg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A A        G      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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