The detailed information of tRNA gene sequence


Sequence ID>WENV180087917
Genome IDMPMF02003889
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 43
End posion on genome 140
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtgatgaccg
tRNA gene sequence 
GGAGGTGCCAGGGTCCCGGTGGGTCCCGCGGACTTCAAATCCGTTGGGCGGCATAGCGAT
GTGTCGTCGGTGGGTTCGACTCCCATGCACCTCCGCCA
Downstream region at tRNA end position 
cgggtttaga
Secondary structure (Cloverleaf model)
>WENV180087917	SeC	TCA
                   g      GCCA cgggtttaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G          T C
                    C     T A C C C     A
      C C C        A      + | | | |     G
    G       T G G G       G T G G G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGGGCGGCATAGCGATGTGTCGTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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