The detailed information of tRNA gene sequence


Sequence ID>WENV180087922
Genome IDMPMF02004088
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 43
End posion on genome 140
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtgatgaccg
tRNA gene sequence 
GGAGGTGCCAGGGTCCCGGTGGGTCCCGCGGACTTCAAATCCGTTGGGCGGCATAGCGAT
GTGTCGTCGGTGGGTTCGACTCCCATGCACCTCCGCCA
Downstream region at tRNA end position 
caggtttgag
Secondary structure (Cloverleaf model)
>WENV180087922	SeC	TCA
                   g      GCCA caggtttgag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G          T C
                    C     T A C C C     A
      C C C        A      + | | | |     G
    G       T G G G       G T G G G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGGGCGGCATAGCGATGTGTCGTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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