The detailed information of tRNA gene sequence


Sequence ID>WENV180087958
Genome IDMPMF02005622
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 467
End posion on genome 393
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgcgcaatt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACtg
Downstream region at tRNA end position 
aaaatagaga
Secondary structure (Cloverleaf model)
>WENV180087958	Met	CAT
                   t      ACtg aaaatagaga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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