The detailed information of tRNA gene sequence


Sequence ID>WENV180088055
Genome IDMPMF02009764
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 321
End posion on genome 246
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ggccggatct
tRNA gene sequence 
GCTCTCTTAGCTCAGTCGGTAGAGCATCGCCATGGTAAGGCGAAGGTCGACAGTTCGATT
CTGTCAGAGAGCTCCA
Downstream region at tRNA end position 
aggagggatg
Secondary structure (Cloverleaf model)
>WENV180088055	Thr	GGT
                   t      TCCA aggagggatg
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     C - G
                     T - A          T T
                    T     C T G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G A C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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