The detailed information of tRNA gene sequence


Sequence ID>WENV180088056
Genome IDMPMF02009764
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 244
End posion on genome 156
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agagctccaa
tRNA gene sequence 
GGAGGGATGCCAGAGCGGACTATTGGGCCACCCTGGAAAGGTGGTGTGGCTTTCGGGTCA
CCGTGAGTTCGAATCTCACTCCCTCCTCCt
Downstream region at tRNA end position 
cgcgggaccg
Secondary structure (Cloverleaf model)
>WENV180088056	Ser	GGA
                   a      TCCt cgcgggaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G A G     C
    G       + | | |                 T T
    A       T T G G
      C T A        G     TGTGGCTTTCGGGTCACC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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