The detailed information of tRNA gene sequence


Sequence ID>WENV180088074
Genome IDMPMF02010927
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 219
End posion on genome 132
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcccttccaa
tRNA gene sequence 
GGGCAGGTGACCGAGCGGCTGAAGGTGCAGCACTGGAAATGCTGTGTACGATTTTTTCGT
ACCGTGGGTTCGAATCCCACCCTGTCCGttg
Downstream region at tRNA end position 
cggcgtgagc
Secondary structure (Cloverleaf model)
>WENV180088074	Ser	GGA
                   a      Gttg cggcgtgagc
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      T G A        G     TGTACGATTTTTTCGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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