The detailed information of tRNA gene sequence


Sequence ID>WENV180088087
Genome IDMPMF02011779
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 439
End posion on genome 364
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcagataga
tRNA gene sequence 
GGTCCGTTGGTGAAGTCGGTTATCACGCTAGCCTGTCACGCTGGTATCAAGGGTTCAAGT
CCCTTACGGACCGCCA
Downstream region at tRNA end position 
ggtcttcccc
Secondary structure (Cloverleaf model)
>WENV180088087	Asp	GTC
                   a      GCCA ggtcttcccc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     T T C C C     A
      T G A        G      | | | | |     A
    C       A G T G       A A G G G     C
    G       | | | |                 T T
    G       T C A C
      T T A        G     TATC
                    C - G
                    T + G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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