The detailed information of tRNA gene sequence


Sequence ID>WENV180088114
Genome IDMPMF02013541
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 316
End posion on genome 240
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gtccagccgt
tRNA gene sequence 
CGGGGAGTAGCTCAGCCTGGTAGAGCACTACGTTCGGGACGTAGGGGCCGGAGGTTCAAA
TCCTCTCTCCCCGACCA
Downstream region at tRNA end position 
gttattctgg
Secondary structure (Cloverleaf model)
>WENV180088114	Pro	CGG
                   t      ACCA gttattctgg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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