The detailed information of tRNA gene sequence


Sequence ID>WENV180088127
Genome IDMPMF02014211
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1233
End posion on genome 1157
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
acaccttgat
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGGAGGTTCAAA
TCCTCCCGTCCCGACCA
Downstream region at tRNA end position 
tatattttcc
Secondary structure (Cloverleaf model)
>WENV180088127	Pro	GGG
                   t      ACCA tatattttcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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