The detailed information of tRNA gene sequence


Sequence ID>WENV180088128
Genome IDMPMF02014249
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 429
End posion on genome 517
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctgatttatt
tRNA gene sequence 
GGAGAGATGGCAGAGTCTGGCTGAATGCGCCGCACTCGAAATGCGGTATATCTTTTGGGT
ATCGGGGGTTCGAATCCCTCTCTCTCCGCta
Downstream region at tRNA end position 
accttaaata
Secondary structure (Cloverleaf model)
>WENV180088128	Ser	CGA
                   t      GCta accttaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        G     TATATCTTTTGGGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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