The detailed information of tRNA gene sequence


Sequence ID>WENV180088140
Genome IDMPMF02014941
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1267
End posion on genome 1343
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccgggtgcgt
tRNA gene sequence 
GGGTCCATGGAGGTAATTGGTAACCTCGTCTAAGTTGTCACTAGGAGTTACGGGTTCAAA
TCCCGTTGGATCCACCA
Downstream region at tRNA end position 
ctttcacccg
Secondary structure (Cloverleaf model)
>WENV180088140	Asp	GTC
                   t      ACCA ctttcacccg
                     G - C
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
    T A A T        G      | | | | |     A
  T         G G A G       A C G G G     C
  G         | | | |                 T T
  G         C C T C
    T A A          G     AGTT
                    T + G
                    C - G
                    T - A
                    A - T
                    A   C
                  G       A
                  T       C
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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