The detailed information of tRNA gene sequence


Sequence ID>WENV180088166
Genome IDMPMF02016486
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3781
End posion on genome 3855
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcacataat
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGTTAGAGCATACGGCTCATATCCGTAGTGTCCGGGGTTCAAT
TCCCTGCACCGCCACtt
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>WENV180088166	Met	CAT
                   t      ACtt ttttattttt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      A G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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