The detailed information of tRNA gene sequence


Sequence ID>WENV180088243
Genome IDMPMF02020195
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4708
End posion on genome 4633
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tctttgacgg
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGACGGTCCCAGGTTCGAA
TCCTGGAGGGCCCACCg
Downstream region at tRNA end position 
tcaactcctg
Secondary structure (Cloverleaf model)
>WENV180088243	Ile2	CAT
                   g      ACCg tcaactcctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    A   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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