The detailed information of tRNA gene sequence


Sequence ID>WENV180088271
Genome IDMPMF02022116
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 211
End posion on genome 138
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttccaattt
tRNA gene sequence 
AGGAGAGTAGCTCAATTGGTAGAGCACCGGCCTCCAAAGCCGGGGGTTGCGGGTTCGATC
CCTGCCTCTCCTGCaa
Downstream region at tRNA end position 
gaaatgaaac
Secondary structure (Cloverleaf model)
>WENV180088271	Trp	CCA
                   t      GCaa gaaatgaaac
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          C T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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