The detailed information of tRNA gene sequence


Sequence ID>WENV180088289
Genome IDMPMF02022938
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4278
End posion on genome 4204
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tccattacac
tRNA gene sequence 
GCTCCCTTCGTCTAGTGGTTAGGACGCTGGCCTCTCACGCCGGTAACAGGGGTTCGAATC
CCCTAGGGAGCGCCA
Downstream region at tRNA end position 
ccttgtttac
Secondary structure (Cloverleaf model)
>WENV180088289	Glu	CTC
                   c      GCCA ccttgtttac
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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