The detailed information of tRNA gene sequence


Sequence ID>WENV180088305
Genome IDMPMF02023493
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 499
End posion on genome 406
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcggtttaa
tRNA gene sequence 
GGAGAGGTGTCCGAGTTGGCTGAAGGAGCACGACTGGAAATCGTGTGTGCTGTTTAAAGC
GGCACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaaatcaaa
Secondary structure (Cloverleaf model)
>WENV180088305	Ser	GGA
                   a      GCCA aaaaatcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTGCTGTTTAAAGCGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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