The detailed information of tRNA gene sequence


Sequence ID>WENV180088306
Genome IDMPMF02023556
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 28
End posion on genome 104
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ataattgaga
tRNA gene sequence 
CGCGGGGTAGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
actgcgacaa
Secondary structure (Cloverleaf model)
>WENV180088306	fMet	CAT
                   a      ACCA actgcgacaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     A
    T       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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