The detailed information of tRNA gene sequence


Sequence ID>WENV180088319
Genome IDMPMF02024486
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 34611
End posion on genome 34701
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
aatgaatatt
tRNA gene sequence
GGAGAGGTGGCTCGAGTGGTTGAAGGCGGCTGTCTTGAAAACAGCTAAGGGGGAAACTCC
TTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position
atacggattt
Secondary structure (Cloverleaf model)
>WENV180088319	Ser	TGA
                   t      GCCA atacggattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T G A G        G      | | | | |     G
  G         C T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    T G A          G     TAAGGGGGAAACTCCTTC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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