The detailed information of tRNA gene sequence


Sequence ID>WENV180088330
Genome IDMPMF02025188
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1379
End posion on genome 1454
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaactcttt
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGATC
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
aattagataa
Secondary structure (Cloverleaf model)
>WENV180088330	Trp	CCA
                   t      GCCA aattagataa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          C T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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