The detailed information of tRNA gene sequence


Sequence ID>WENV180088340
Genome IDMPMF02025728
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 108
End posion on genome 184
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accaaaatta
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCACGTGCCTGTCACGCACGGGGCCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
tcttttgaat
Secondary structure (Cloverleaf model)
>WENV180088340	Asp	GTC
                   a      GCCA tcttttgaat
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGCC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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