The detailed information of tRNA gene sequence


Sequence ID>WENV180088345
Genome IDMPMF02025793
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 348
End posion on genome 425
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgccgcagcg
tRNA gene sequence 
GGGCCCGTAGGGTAGCTTGGTCCATCCTTCGGCGTTCGGGACGCCGGTACTCCAGTTCAA
ATCTGGGCGGGCCCACCA
Downstream region at tRNA end position 
ttcagccact
Secondary structure (Cloverleaf model)
>WENV180088345	Pro	CGG
                   g      ACCA ttcagccact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G G T C     A
    T C G A        A      + | | | |     A
  T         T G G G       T C C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        T     GTAC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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