The detailed information of tRNA gene sequence


Sequence ID>WENV180088358
Genome IDMPMF02026256
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 964
End posion on genome 1040
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ataattgaga
tRNA gene sequence 
CGCGGGGTAGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
atttaaaagg
Secondary structure (Cloverleaf model)
>WENV180088358	fMet	CAT
                   a      ACCA atttaaaagg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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