The detailed information of tRNA gene sequence


Sequence ID>WENV180088361
Genome IDMPMF02026403
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1392
End posion on genome 1318
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagtgaattt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAA
TCCCTCCTCCGCTACaa
Downstream region at tRNA end position 
aaaaaaccca
Secondary structure (Cloverleaf model)
>WENV180088361	Met	CAT
                   t      ACaa aaaaaaccca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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