The detailed information of tRNA gene sequence


Sequence ID>WENV180088368
Genome IDMPMF02026483
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2408
End posion on genome 2483
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggcaggatac
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGATC
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
acccgctctt
Secondary structure (Cloverleaf model)
>WENV180088368	Trp	CCA
                   c      GCCA acccgctctt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          C T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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