The detailed information of tRNA gene sequence


Sequence ID>WENV180088408
Genome IDMPMF02028416
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 129
End posion on genome 53
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aattaattaa
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCGGCGGTTCGAA
TCCGTCCCCCGCAACCA
Downstream region at tRNA end position 
aaggcttttt
Secondary structure (Cloverleaf model)
>WENV180088408	fMet	CAT
                   a      ACCA aaggcttttt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      C G A        G      | + | | |     G
    C       C G A G       G G C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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