The detailed information of tRNA gene sequence


Sequence ID>WENV180088409
Genome IDMPMF02028546
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 115
End posion on genome 29
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tctagcgccc
tRNA gene sequence 
GGGTCGGTGGGTGAGTGGCTAATACCACCAGACTGTAAATCTGGCGCCCGGAAGGGCTAC
GCAGGTTCGAATCCTGCCCGGCCCACCg
Downstream region at tRNA end position 
cttcgcggcg
Secondary structure (Cloverleaf model)
>WENV180088409	Tyr	GTA
                   c      ACCg cttcgcggcg
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G T G G       G C A G G     C
    G       + | | |                 T T
    C       T A C C
      T A A        A     CGCCCGGAAGGGCTAC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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