The detailed information of tRNA gene sequence


Sequence ID>WENV180088411
Genome IDMPMF02028635
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1078
End posion on genome 1004
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgatactaga
tRNA gene sequence 
GGGCCGGTGGTTTAGGGGTATAATGCCTCGTTCGCAACGAGGATGTCGAGGGTTCGATTC
TCTCCCGGTCCACCA
Downstream region at tRNA end position 
tttttaaata
Secondary structure (Cloverleaf model)
>WENV180088411	Ala	CGC
                   a      ACCA tttttaaata
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     C T C T C     A
        G A        G      | | | + |     G
      G     T T T G       G A G G G     C
      G       | | +                 T T
      G     T A A T
        T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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