The detailed information of tRNA gene sequence


Sequence ID>WENV180088466
Genome IDMPMF02031081
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 14282
End posion on genome 14375
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccattattat
tRNA gene sequence 
GGAAGGATGGGTGAGTTGGTTTAAACCAGGAGTTTGCTAAACTTCCGTAGGTTATAATGA
CCTACCGAGGGTTCGAATCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
caaaaactaa
Secondary structure (Cloverleaf model)
>WENV180088466	Ser	GCT
                   t      GCCA caaaaactaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTAGGTTATAATGACCTACC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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