The detailed information of tRNA gene sequence


Sequence ID>WENV180088467
Genome IDMPMF02031094
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 369
End posion on genome 464
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
actcaacaca
tRNA gene sequence 
GGAGAGTGAAAGGTGGCTGGTGCTCCTCGCGGTCTTCAAAACCGTTGTCGGTTCGTGAAC
GGGCCGAGGTAGGTTCGATTCCTACCCTCTCCGCCA
Downstream region at tRNA end position 
attttccttc
Secondary structure (Cloverleaf model)
>WENV180088467	SeC	TCA
                   a      GCCA attttccttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     C A T C C     A
    C G G T        A      | | | | |     G
  T         G G A A       G T A G G     C
  G         + |   |                 T T
  G         T C C T
    T G C          C     TGTCGGTTCGTGAACGGGCCGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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