The detailed information of tRNA gene sequence


Sequence ID>WENV180088480
Genome IDMPMF02031796
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 337
End posion on genome 410
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aataaacaga
tRNA gene sequence 
GGGGGCGTAATTTAATGGTAGAATAGCGGTCTCCAAAACCGCTAATGGGAGTTCGATTCT
CTCCGCCCCTGCCA
Downstream region at tRNA end position 
tcgtagacga
Secondary structure (Cloverleaf model)
>WENV180088480	Trp	CCA
                   a      GCCA tcgtagacga
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C T C T C     A
        A A        A      | + | | |     G
      T     T T T A       G G G A G     C
      G     + | | |                 T T
      G     G A A T
        T A        A     TAAT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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