The detailed information of tRNA gene sequence


Sequence ID>WENV180088493
Genome IDMPMF02032286
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 67
End posion on genome 157
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcactcacG
tRNA gene sequence 
AAAGAGATGGCTGAGCGGTTGAAAGCGCACGCTTGGAAAGTGTGTATACGAGAAATCGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttaatttaag
Secondary structure (Cloverleaf model)
>WENV180088493	Ser	GGA
                   G      GCCA ttaatttaag
                     A   C
                     A   C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATACGAGAAATCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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