The detailed information of tRNA gene sequence


Sequence ID>WENV180088508
Genome IDMPMF02033038
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1995
End posion on genome 1920
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gttacttttc
tRNA gene sequence 
GGGCCTGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGCCGTTGGTTCAATC
CCAACCAGGCCCACCA
Downstream region at tRNA end position 
ttaagcaaca
Secondary structure (Cloverleaf model)
>WENV180088508	Ile2	CAT
                   c      ACCA ttaagcaaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C T
                    T     C A A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGCC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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