The detailed information of tRNA gene sequence


Sequence ID>WENV180088510
Genome IDMPMF02033148
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 14
End posion on genome 90
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
agaacactgc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATAGGTCGAAGGTTCGAG
TCCTTCCGGGCCCACCA
Downstream region at tRNA end position 
tttttcccct
Secondary structure (Cloverleaf model)
>WENV180088510	Ile2	CAT
                   c      ACCA tttttcccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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