The detailed information of tRNA gene sequence


Sequence ID>WENV180088521
Genome IDMPMF02034074
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 11302
End posion on genome 11377
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
acagtttcgg
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGTAAGAGCGGCCGGCTCATAACCGGTTGGTCGCAGGTTCGATC
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
cgccctatca
Secondary structure (Cloverleaf model)
>WENV180088521	Ile2	CAT
                   g      ACCA cgccctatca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     C G T C C     A
      C G A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      A A          G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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