The detailed information of tRNA gene sequence


Sequence ID>WENV180088540
Genome IDMPMF02034964
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 876
End posion on genome 804
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcaagcactg
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGTAGAGCGCTGTGATCGCACCGCAGAGGTCAGGGGTTCGAAT
CCCCTATTCTCCAttt
Downstream region at tRNA end position 
ggttagcagc
Secondary structure (Cloverleaf model)
>WENV180088540	Ala	CGC
                   g      Attt ggttagcagc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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