The detailed information of tRNA gene sequence


Sequence ID>WENV180088541
Genome IDMPMF02035110
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2258
End posion on genome 2171
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttgagcct
tRNA gene sequence 
GGAGAGGTCGCATAGTCTGGCCTAGTGCGCTCGCTTGGAAAGCGAGTATGGTGAGAGCCA
TCGTGGGTTCGAATCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
tcgggggcag
Secondary structure (Cloverleaf model)
>WENV180088541	Ser	GGA
                   t      GCtc tcgggggcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TATGGTGAGAGCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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