The detailed information of tRNA gene sequence


Sequence ID>WENV180088575
Genome IDMPMF02036131
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 5478
End posion on genome 5391
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
actttccggc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTATGGTGCCGCTCTCGAAAAGCGGTGTGCAGCAATGCACC
GGGAGTTCGAATCTCCCCCTCTCCGCCA
Downstream region at tRNA end position 
gccattccca
Secondary structure (Cloverleaf model)
>WENV180088575	Ser	CGA
                   c      GCCA gccattccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G A G     C
    G       + | |                   T T
    T       T G G T
      T T A        G     TGTGCAGCAATGCACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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