The detailed information of tRNA gene sequence


Sequence ID>WENV180088582
Genome IDMPMF02036466
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 36396
End posion on genome 36492
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aggctgtcgt
tRNA gene sequence 
GGGAGTGGATGATGTCCGGTGGTGTCCGCGGTCTTCAAAACCGTTGTGGGGCTACGTCGT
AGTCCTGGGTGGGTTCGACTCCCACGCACTCCCGCCA
Downstream region at tRNA end position 
ccggcaacct
Secondary structure (Cloverleaf model)
>WENV180088582	SeC	TCA
                   t      GCCA ccggcaacct
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    G       G T A G       G T G G G     C
    G       + + | |                 T T
    T       T G T C
      G G          C     TGTGGGGCTACGTCGTAGTCCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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