The detailed information of tRNA gene sequence


Sequence ID>WENV180088597
Genome IDMPMF02037804
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 293
End posion on genome 219
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aagaaatttc
tRNA gene sequence 
GGGCGATTAGCTCAGCTGGTTAGAGCGCTATCTTCACATGGTAGAAGTCGGGGGTTCAAA
TCCCTCATCGCCCACtc
Downstream region at tRNA end position 
attattatat
Secondary structure (Cloverleaf model)
>WENV180088597	Val	CAC
                   c      ACtc attattatat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    T + G
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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